STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GPQ6Uncharacterized protein. (208 aa)    
Predicted Functional Partners:
A0A1Y2H203
RRM domain-containing protein.
    
 
 0.641
A0A1Y2G7K0
Serine/threonine-protein phosphatase.
    
  0.635
A0A1Y2GAX7
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.635
A0A1Y2GR24
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.635
A0A1Y2GU07
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.635
A0A1Y2GV53
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.635
A0A1Y2GVX2
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.635
A0A1Y2GGN9
Uncharacterized protein.
     
 0.624
A0A1Y2GP13
Metallo-dependent phosphatase-like protein.
    
  0.603
A0A1Y2GPK6
Metallo-dependent phosphatase-like protein.
    
  0.603
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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