STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GPU7Uncharacterized protein. (251 aa)    
Predicted Functional Partners:
A0A1Y2G9I2
Ribosomal protein S12/S23-domain-containing protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
A0A1Y2GFM1
Ribosomal protein S2, flavodoxin-like domain-containing protein; Belongs to the universal ribosomal protein uS2 family.
  
 0.999
A0A1Y2GG04
Ribosomal protein S9/S16-domain-containing protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.999
A0A1Y2GIB0
30S ribosomal protein S6.
  
 0.999
A0A1Y2GJR0
L51_S25_CI-B8 domain-containing protein.
   
 0.999
A0A1Y2GNN5
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
A0A1Y2GRZ1
30S ribosomal protein S16.
  
 0.999
A0A1Y2GS51
Ribosomal protein S10 domain-containing protein.
  
 0.999
A0A1Y2GSM8
Mitochondrial ribosomal death-associated protein 3-domain-containing protein.
   
 0.999
A0A1Y2GUA4
Uncharacterized protein.
  
 0.999
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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