STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GQ98Snapin/Pallidin-domain-containing protein. (196 aa)    
Predicted Functional Partners:
A0A1Y2GL38
GCN5-like 1.
   
 0.970
A0A1Y2G9B8
Biogenesis of lysosome-related organelles complex-1 subunit 2-domain-containing protein.
   
 
 0.898
A0A1Y2H162
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.720
A0A1Y2GFL3
Adaptin N terminal region-domain-containing protein.
    
 0.713
A0A1Y2H2M6
Synaptobrevin.
     
 0.709
A0A1Y2GKN1
Uncharacterized protein.
   
 
 0.704
A0A1Y2GRQ3
Adaptin N terminal region-domain-containing protein.
    
 0.682
A0A1Y2GDQ4
AP-1 complex subunit gamma.
    
  0.674
A0A1Y2GQW9
Uncharacterized protein.
     
 0.672
A0A1Y2H4L2
Uncharacterized protein.
     
 0.672
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.