STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GQB1Metallo-dependent phosphatase-like protein. (507 aa)    
Predicted Functional Partners:
A0A1Y2GRX2
NUDIX hydrolase domain-like protein.
   
 0.871
A0A1Y2GZP7
Thioredoxin-like protein.
  
 
 0.857
A0A1Y2GLG5
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
  
 0.816
A0A1Y2GR59
Phosphotyrosine protein phosphatase I superfamily.
    
 0.807
A0A1Y2GLM2
Histidine phosphatase superfamily; Belongs to the histidine acid phosphatase family.
   
 
 0.798
A0A1Y2GJ77
Flavokinase domain-containing protein.
    
 0.790
A0A1Y2GBX3
SET domain-containing protein.
     
 0.785
A0A1Y2GUM1
Uncharacterized protein.
   
 0.783
A0A1Y2GD15
Uncharacterized protein.
  
 0.779
A0A1Y2GP37
Histidine phosphatase superfamily; Belongs to the histidine acid phosphatase family.
     
 0.765
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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