STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GR28Putative NADH-dependent flavin oxidoreductase. (408 aa)    
Predicted Functional Partners:
A0A1Y2GAS4
FAD binding domain-domain-containing protein.
 
 
 0.862
A0A1Y2GSQ5
Electron transfer flavo protein, beta-subunit.
  
 
 0.744
A0A1Y2GZC3
Rieske domain-containing protein.
   
 0.717
A0A1Y2G9V1
ETF domain-containing protein.
   
 
 0.667
A0A1Y2GK10
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.633
A0A1Y2GQD0
Thioredoxin reductase.
  
 
 0.607
A0A1Y2G9Y7
Pyr_redox_2 domain-containing protein.
   
 0.598
A0A1Y2G652
AMP-dependent synthetase and ligase.
  
 
 0.593
A0A1Y2GQ31
Acetyl-coenzyme A synthetase.
  
 
 0.593
A0A1Y2GXS3
Acetyl-coenzyme A synthetase.
  
 
 0.593
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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