STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GR74Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (350 aa)    
Predicted Functional Partners:
A0A1Y2GUS0
Dihydrofolate reductase-like domain-containing protein; Belongs to the dihydrofolate reductase family.
    
 0.827
A0A1Y2GPX0
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.800
A0A1Y2GQQ2
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.800
A0A1Y2H1I6
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.800
A0A1Y2G6K3
Pyridoxal phosphate-dependent transferase.
  
 
 0.779
A0A1Y2GB53
Hydroxyacid oxidase 1-like protein.
  
 
 0.779
A0A1Y2GWA3
Aminotransferase class V.
  
 
 0.779
A0A1Y2GPZ9
Alcohol dehydrogenase, iron containing, 1, isoform CRA_b.
  
 
 0.776
A0A1Y2GQ26
Tryptophan synthase.
  
 
 0.776
A0A1Y2GFD5
Chaperonin 10-like protein.
  
 
 0.773
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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