STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GRJ6Uncharacterized protein. (1570 aa)    
Predicted Functional Partners:
A0A1Y2G6D9
Ubiquitin carboxyl-terminal hydrolase.
    
  0.676
A0A1Y2H0A5
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.665
A0A1Y2GJY8
RING-type domain-containing protein.
    
 0.661
A0A1Y2H0R4
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.659
A0A1Y2H1X1
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.639
A0A1Y2H0B4
Putative intracellular protein transport-related protein; Belongs to the adaptor complexes medium subunit family.
    
  0.627
A0A1Y2GJA3
Uncharacterized protein.
    
 0.625
A0A1Y2G5L8
ANTH domain-domain-containing protein.
    
 0.623
A0A1Y2GI44
WD40-repeat-containing domain protein.
    
  0.611
A0A1Y2H2M6
Synaptobrevin.
    
  0.574
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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