STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GSV0Glycoside hydrolase superfamily. (933 aa)    
Predicted Functional Partners:
A0A1Y2H138
Uncharacterized protein.
    
 0.848
A0A1Y2H3C6
WD40-repeat-containing domain protein.
   
 0.819
A0A1Y2G5E0
Alpha-glucosidase.
    
 0.811
A0A1Y2GCI2
Glycosyl hydrolases family 31-domain-containing protein.
    
 0.811
A0A1Y2GBT6
MAGE family-domain-containing protein.
    
 0.783
A0A1Y2GLT4
Ipi1_N domain-containing protein.
    
 0.782
A0A1Y2GTP4
Endoglucanase.
    
  0.778
A0A1Y2G7X3
Small subunit of carbamoyl-phosphate synthase.
 
  
  0.777
A0A1Y2G8N2
Endopolygalacturonase.
    
 0.765
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.764
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.