STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GTV3Signal peptidase subunit 3. (181 aa)    
Predicted Functional Partners:
A0A1Y2G544
Signal peptidase complex subunit 2.
   
 0.991
A0A1Y2GNU4
Microsomal signal peptidase 12 kDa subunit-domain-containing protein.
   
 0.989
A0A1Y2GE77
Signal peptidase complex catalytic subunit SEC11.
   
 0.981
A0A1Y2GQY2
Peptidase S24/S26A/S26B/S26C.
    
 0.918
A0A1Y2GUW5
Mitochondrial inner membrane protease subunit.
    
 0.918
A0A1Y2H273
Uncharacterized protein.
    
 0.918
A0A1Y2G6D2
Uncharacterized protein.
   
 
  0.760
A0A1Y2GXR5
Sec63 Brl domain-domain-containing protein.
    
 
 0.682
A0A1Y2GDG2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the en [...]
   
 0.633
A0A1Y2GKV7
Uncharacterized protein.
   
 
  0.525
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.