STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GU54Putative actin-binding protein cofilin; Belongs to the actin-binding proteins ADF family. (136 aa)    
Predicted Functional Partners:
A0A1Y2GWC3
Calponin homology domain-containing protein.
 
  
 
 0.954
A0A1Y2GDK3
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.948
A0A1Y2GKT0
Actin family; Belongs to the actin family.
   
 0.934
A0A1Y2GKX7
Actin family; Belongs to the actin family.
   
 0.934
A0A1Y2GU56
Actin-like protein; Belongs to the actin family.
   
 0.934
A0A1Y2GUJ3
Gamma-actin.
   
 0.934
A0A1Y2GF04
Actin family; Belongs to the actin family.
   
 0.920
A0A1Y2GZF0
Actin family; Belongs to the actin family.
   
 0.915
A0A1Y2H1V4
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 0.915
A0A1Y2GCP2
Hsp60-like protein; Belongs to the chaperonin (HSP60) family.
 
 
  
 0.908
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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