STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GVG5Tropomyosin. (161 aa)    
Predicted Functional Partners:
A0A1Y2GI33
Uncharacterized protein.
   
 0.983
A0A1Y2GQN0
Class I glutamine amidotransferase-like protein.
   
 0.982
A0A1Y2GTY7
Myosin tail-domain-containing protein.
   
 0.948
A0A1Y2GU09
Myosin N-terminal SH3-like domain-containing protein.
   
 0.944
A0A1Y2GKT0
Actin family; Belongs to the actin family.
   
 0.883
A0A1Y2GKX7
Actin family; Belongs to the actin family.
   
 0.883
A0A1Y2GU56
Actin-like protein; Belongs to the actin family.
   
 0.883
A0A1Y2GUJ3
Gamma-actin.
   
 0.883
A0A1Y2H0S0
Uncharacterized protein.
   
 0.878
A0A1Y2G9L0
Actin-domain-containing protein; Belongs to the actin family.
   
 0.875
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.