STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GVJ4Serine dehydratase alpha chain-domain-containing protein. (637 aa)    
Predicted Functional Partners:
A0A1Y2GQ26
Tryptophan synthase.
     
 0.754
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
   
 0.695
A0A1Y2GK71
S-adenosyl-L-methionine-dependent methyltransferase.
    
 0.687
A0A1Y2GKC3
S-adenosyl-L-methionine-dependent methyltransferase.
    
 0.687
A0A1Y2GXW7
Uncharacterized protein.
    
 0.687
A0A1Y2GMZ6
Threonine dehydratase.
     
 0.657
A0A1Y2G9Q0
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
   
 
 0.611
A0A1Y2G9N9
CDP-alcohol phosphatidyltransferase-domain-containing protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.602
A0A1Y2GNB6
HAD-like domain-containing protein.
     
 0.602
A0A1Y2GPG0
HAD hydrolase.
     
 0.602
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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