STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GVV9YL1 nuclear protein C-terminal domain-domain-containing protein. (166 aa)    
Predicted Functional Partners:
A0A1Y2GB57
Actin-like protein Arp5; Belongs to the actin family.
    
 0.997
A0A1Y2H311
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.994
A0A1Y2GW37
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
  
 
 0.989
A0A1Y2GR96
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.982
A0A1Y2GTH2
PAPA-1 domain-containing protein.
    
 0.965
A0A1Y2GZF0
Actin family; Belongs to the actin family.
    
 0.960
A0A1Y2H1A0
SNF2 family N-terminal domain-domain-containing protein.
    
 0.949
A0A1Y2GZ33
TPR_REGION domain-containing protein.
    
 0.901
A0A1Y2GKT0
Actin family; Belongs to the actin family.
    
 0.852
A0A1Y2GKX7
Actin family; Belongs to the actin family.
    
 0.852
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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