STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GW82Smr domain-containing protein. (353 aa)    
Predicted Functional Partners:
A0A1Y2GPI1
Uncharacterized protein.
   
   0.832
A0A1Y2GCT8
B18 subunit of NADH:ubiquinone oxidoreductase.
   
   0.705
A0A1Y2GEA7
NADH-ubiquinone oxidoreductase B18 subunit-domain-containing protein.
   
   0.705
A0A1Y2GA67
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
  0.697
A0A1Y2GFP5
Uncharacterized protein.
    
  0.697
A0A1Y2GXJ8
Uncharacterized protein; Belongs to the complex I LYR family.
   
   0.686
A0A1Y2GXL7
Uncharacterized protein.
   
   0.683
A0A1Y2GYG3
Zinc-finger domain-domain-containing protein.
   
   0.682
A0A1Y2GNV2
ETC complex I subunit conserved region-domain-containing protein.
   
   0.675
A0A1Y2H1V9
Thioredoxin-like protein.
   
   0.663
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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