STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GX84Allantoicase. (372 aa)    
Predicted Functional Partners:
A0A1Y2GZI4
Ureidoglycolate hydrolase.
 
 
 0.831
A0A1Y2GEX6
Allantoinase.
 
 
 0.817
A0A1Y2G9I5
Pex19 protein family-domain-containing protein.
   
 0.770
A0A1Y2GNR0
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
     
 0.665
A0A1Y2GF48
Peroxin 13, N-terminal region-domain-containing protein.
   
 
 0.639
A0A1Y2H011
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
     
 0.638
A0A1Y2GGY6
Peroxisomal membrane protein PEX16.
   
 
 0.629
A0A1Y2G2K8
Peroxisomal biogenesis factor 11.
   
 0.625
A0A1Y2GJ24
Peroxisomal biogenesis factor 11.
   
 0.625
A0A1Y2GSN8
Peroxisomal biogenesis factor 11.
   
 0.625
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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