STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GXX8Folate-sensitive fragile site protein Fra10Ac1-domain-containing protein. (277 aa)    
Predicted Functional Partners:
A0A1Y2G8D5
Nuclear protein DGCR14.
    
   0.710
A0A1Y2GBC5
Uncharacterized protein.
   
   0.702
A0A1Y2GBC6
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
   0.702
A0A1Y2GLE7
Uncharacterized protein.
    
 
 0.648
A0A1Y2H091
RED-like protein N-terminal region-domain-containing protein.
   
   0.618
A0A1Y2G4X7
PSP domain-containing protein.
    
   0.606
A0A1Y2G897
Cir_N domain-containing protein.
    
   0.567
A0A1Y2G5W8
TRP-like family.
    
  0.449
A0A1Y2GD34
Uncharacterized protein.
    
  0.449
A0A1Y2GDC7
Uncharacterized protein.
    
  0.449
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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