STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GY02Ubiquitin-related domain-containing protein. (94 aa)    
Predicted Functional Partners:
A0A1Y2G8B9
Putative ubiquitin--protein ligase hus5; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
A0A1Y2GFL0
PINIT domain-domain-containing protein.
    
 0.999
A0A1Y2GIP2
Ubiquitin-activating enzyme E1-like; Belongs to the ubiquitin-activating E1 family.
   
 0.999
A0A1Y2GNX0
ThiF domain-containing protein.
   
 0.987
A0A1Y2GW54
Uncharacterized protein.
     
 0.978
A0A1Y2GF59
Ubiquitin-like protein.
   
 0.977
A0A1Y2H5E2
Uncharacterized protein.
    
 0.977
A0A1Y2GHM9
ULP_PROTEASE domain-containing protein.
   
 0.969
A0A1Y2GMC3
ULP_PROTEASE domain-containing protein.
   
 0.969
A0A1Y2GJB8
ULP_PROTEASE domain-containing protein.
    
 0.965
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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