STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GYX3L-gulono-gamma-lactone oxidase. (486 aa)    
Predicted Functional Partners:
A0A1Y2GB53
Hydroxyacid oxidase 1-like protein.
  
 0.857
A0A1Y2GJ85
MBOAT_2 domain-containing protein.
  
 0.857
A0A1Y2GRI1
NADP-dependent oxidoreductase domain-containing protein.
     
 0.837
A0A1Y2H3N9
Uncharacterized protein.
   
 0.822
A0A1Y2GX66
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
 0.795
A0A1Y2GAX4
Alpha/Beta hydrolase protein.
   
 0.793
A0A1Y2GYS1
Alpha/Beta hydrolase protein.
   
 0.779
A0A1Y2GBE6
Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 0.773
A0A1Y2GYP5
Alpha/Beta hydrolase protein.
   
 0.770
A0A1Y2G9V1
ETF domain-containing protein.
  
 
 0.766
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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