STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GZ15Beta-lactamase-like protein. (976 aa)    
Predicted Functional Partners:
A0A1Y2GFC7
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.978
A0A1Y2GTG5
SPOC like C-terminal domain-containing protein.
   
 0.956
A0A1Y2GUT6
CPSF A subunit region-domain-containing protein.
   
 0.931
A0A1Y2GTI4
Uncharacterized protein.
    
 0.919
A0A1Y2GY12
Symplekin tight junction protein C terminal-domain-containing protein.
   
 0.919
A0A1Y2GZV5
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.910
A0A1Y2GN32
Armadillo-type protein.
   
 0.908
A0A1Y2GRY7
DNA ligase.
   
 0.902
A0A1Y2GG63
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
   
 0.896
A0A1Y2G6J3
CID domain-containing protein.
    
 0.893
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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