STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GZM140S ribosomal protein S21; Required for the processing of the 20S rRNA-precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Has a physiological role leading to 18S rRNA stability. (85 aa)    
Predicted Functional Partners:
A0A1Y2GZH2
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.916
A0A1Y2GUM1
Uncharacterized protein.
   
 0.907
A0A1Y2GC18
Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.900
A0A1Y2GF98
Ribosomal protein S19-domain-containing protein; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.900
A0A1Y2GL53
40S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.896
A0A1Y2GT48
40S ribosomal protein S22-A; Belongs to the universal ribosomal protein uS8 family.
   
 
 0.896
A0A1Y2GBB7
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.891
A0A1Y2GMA5
Ribosomal protein L37; Binds to the 23S rRNA.
   
 
 0.891
A0A1Y2GUV6
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
   0.891
A0A1Y2G5F6
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.884
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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