STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GZN6Uncharacterized protein. (970 aa)    
Predicted Functional Partners:
A0A1Y2GCK7
Armadillo-type protein.
     
 0.599
A0A1Y2H360
RRM domain-containing protein.
    
  0.598
A0A1Y2GF70
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.586
A0A1Y2GWA7
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
    
  0.586
A0A1Y2GTX4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.574
A0A1Y2H4P6
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.574
A0A1Y2GLW3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.519
A0A1Y2GL43
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.482
A0A1Y2G9B3
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.464
A0A1Y2GFA5
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.464
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.