STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2H1I5Peptidase family M41-domain-containing protein; Belongs to the AAA ATPase family. (643 aa)    
Predicted Functional Partners:
A0A1Y2GF37
Prohibitin.
   
 0.918
A0A1Y2GF92
Prohibitin.
   
 0.918
A0A1Y2GM27
Prohibitin.
   
 0.879
A0A1Y2GSS1
Prohibitin.
   
 0.879
A0A1Y2GFY5
Translation protein SH3-like domain-containing protein.
   
 
 0.833
A0A1Y2GPU7
Uncharacterized protein.
   
 
 0.821
A0A1Y2H1S2
50S ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
   
 
 0.821
A0A1Y2GCT0
Ribosomal L27 protein-domain-containing protein.
  
 
 0.817
A0A1Y2GCH9
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.811
A0A1Y2GUA4
Uncharacterized protein.
   
 
 0.807
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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