STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2H2A7Protein-tyrosine phosphatase-like protein. (151 aa)    
Predicted Functional Partners:
A0A1Y2GFI5
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
  0.720
A0A1Y2GHG8
Uncharacterized protein.
    
 
 0.537
A0A1Y2GMF1
Uncharacterized protein.
    
 
 0.537
A0A1Y2GRJ1
Uncharacterized protein.
    
 
 0.537
A0A1Y2GLL9
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 
  0.432
A0A1Y2H2A5
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
   
 
  0.432
A0A1Y2GCZ3
Protein kinase domain-containing protein.
     
 0.410
A0A1Y2GIR5
Kinase-like domain-containing protein.
     
 0.410
A0A1Y2GRA2
SMP-LTD domain-containing protein.
     
 0.410
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
Server load: low (30%) [HD]