STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2H2E2Calmodulin-like protein 5. (157 aa)    
Predicted Functional Partners:
A0A1Y2GUM1
Uncharacterized protein.
    
 0.926
A0A1Y2GTY7
Myosin tail-domain-containing protein.
   
 0.880
A0A1Y2GQN0
Class I glutamine amidotransferase-like protein.
   
 0.872
A0A1Y2GSW7
Dynein heavy chain.
   
 0.854
A0A1Y2GU09
Myosin N-terminal SH3-like domain-containing protein.
   
 0.849
A0A1Y2GW54
Uncharacterized protein.
    
 0.846
A0A1Y2GAA9
Serine/threonine-protein phosphatase.
    
 0.835
A0A1Y2GY32
Serine/threonine-protein phosphatase.
    
 0.835
A0A1Y2GRX8
Kinase-like domain-containing protein.
    
 0.813
A0A1Y2GI44
WD40-repeat-containing domain protein.
   
 0.808
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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