STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2H3B7Uncharacterized protein. (1283 aa)    
Predicted Functional Partners:
A0A1Y2G9T1
Glutamine amidotransferase type-2 domain-containing protein.
  
 0.948
A0A1Y2G9Y7
Pyr_redox_2 domain-containing protein.
  
 0.858
A0A1Y2GK26
Aspartate aminotransferase.
   
 0.837
A0A1Y2GVU9
Aspartate/glutamate/uridylate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.797
A0A1Y2GN44
Dihydrolipoyl dehydrogenase.
  
 
 0.786
A0A1Y2GL84
Carbon-nitrogen hydrolase.
   
 
 0.780
A0A1Y2GLL0
Aminotransferase class-III-domain-containing protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.759
A0A1Y2GJ25
Aspartate aminotransferase.
   
 0.751
A0A1Y2H1C6
Aspartate aminotransferase.
   
 0.751
A0A1Y2GUM1
Uncharacterized protein.
    
 0.749
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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