STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2H480GATA-type domain-containing protein. (1024 aa)    
Predicted Functional Partners:
A0A1Y2GQI5
Uncharacterized protein.
    
 0.696
A0A1Y2GC19
Histone H2A; Belongs to the histone H2A family.
    
 0.646
A0A1Y2GI33
Uncharacterized protein.
    
 0.634
A0A1Y2GM37
SET domain-containing protein.
    
  0.631
A0A1Y2GHI9
Uncharacterized protein.
    
  0.606
A0A1Y2GJH0
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.599
A0A1Y2H3Z7
S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
  0.599
A0A1Y2GF88
Uncharacterized protein.
    
 0.555
A0A1Y2GH68
Bacterial low temperature requirement A protein-domain-containing protein.
    
 0.555
A0A1Y2GKR1
Uncharacterized protein.
    
 0.555
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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