STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB99510.1KEGG: rle:RL2017 hypothetical protein. (206 aa)    
Predicted Functional Partners:
SMB99511.1
KEGG: cff:CFF8240_1204 hypothetical protein; SPTR: A0NPC6 Putative uncharacterized protein.
       0.791
SMB99496.1
Extracellular solute-binding protein family 1; InterPro IPR006059; COGs: COG4134 ABC-type uncharacterized transport system periplasmic component; KEGG: dvu:DVU2779 hypothetical protein; SPTR: A1ZSX7 Protein YnjB; PFAM: extracellular solute-binding protein family 1.
       0.721
SMB99500.1
Binding-protein-dependent transport systems inner membrane component; InterPro IPR000515; KEGG: atc:AGR_L_602 putative ABC-transporter transport protein; SPTR: A1ZT27 ABC transporter, permease protein, putative; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.721
SMB99502.1
Binding-protein-dependent transport systems inner membrane component; InterPro IPR000515; COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; KEGG: avi:Avi_2178 ABC transporter membrane spanning protein; SPTR: A1ZT28 Putative ABC-transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component.
       0.721
SMB99494.1
TonB-dependent receptor plug; InterPro IPR012910; KEGG: sal:Sala_2698 TonB-dependent receptor; SPTR: A1ZYS6 TonB-dependent receptor domain protein; PFAM: TonB-dependent receptor plug.
       0.627
SMB99513.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; KEGG: har:HEAR2851 spermidine/putrescine ABC transporter ATP-binding subunit; SPTR: A1ZTA7 Sulfate/thiosulfate import ATP-binding protein CysA; SMART: AAA ATPase; PFAM: ABC transporter related.
       0.523
SMB99515.1
Radical SAM domain protein; InterPro IPR007197; COGs: COG0535 Fe-S oxidoreductase; KEGG: pla:Plav_2003 hypothetical protein; SPTR: A1ZYM9 Radical SAM domain protein; PFAM: Radical SAM domain protein.
       0.523
SMB99492.1
COGs: COG3222 conserved hypothetical protein; KEGG: pca:Pcar_2980 hypothetical protein; SPTR: A2TZF7 Putative uncharacterized protein.
       0.428
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.