STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97201.1Transcriptional regulator, TrmB; InterPro IPR002831:IPR005650; COGs: COG3682 transcriptional regulator protein; KEGG: mxa:MXAN_4242 putative transcriptional regulator; SPTR: A1ZPU5 Putative transcriptional regulator; PFAM: Penicillinase repressor; transcriptional regulator TrmB. (140 aa)    
Predicted Functional Partners:
SMB97203.1
Peptidase M56 BlaR1; InterPro IPR008756; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; KEGG: sus:Acid_5553 peptidase M56, BlaR1; SPTR: A1ZPU6 TonB domain/peptidase M56 domain protein, putative; PFAM: peptidase M56 BlaR1.
 
 
  0.982
SMB84238.1
Transcriptional repressor, CopY family; InterPro IPR005650; COGs: COG3682 transcriptional regulator protein; KEGG: aba:Acid345_3296 transcriptional repressor, CopY family; SPTR: A5ZKI0 Putative uncharacterized protein; PFAM: Penicillinase repressor.
  
  
  0.884
SMB94106.1
Transcriptional repressor, CopY family; InterPro IPR005650; COGs: COG3682 transcriptional regulator protein; KEGG: aba:Acid345_3296 transcriptional repressor, CopY family; SPTR: A1ZEY2 Transcriptional regulator; PFAM: Penicillinase repressor.
  
  
 
0.871
SMB90875.1
TonB family protein; InterPro IPR003538:IPR006260; KEGG: bur:Bcep18194_A4356 TonB-like protein; SPTR: A5ZKH9 Putative uncharacterized protein; PFAM: Gram-negative tonB protein; TIGRFAM: TonB family protein.
  
 
  0.611
SMB94109.1
TonB family protein; InterPro IPR008756:IPR003538:IPR001915:IPR006260; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; KEGG: bur:Bcep18194_A4356 TonB-like protein; SPTR: A1ZEY3 TonB, putative; PFAM: Gram-negative tonB protein; peptidase M56 BlaR1; peptidase M48 Ste24p; TIGRFAM: TonB family protein.
  
 
  0.611
SMB93508.1
TonB family protein; InterPro IPR006260; KEGG: mxa:MXAN_1688 TonB family protein; SPTR: A1ZDR6 KWG; TIGRFAM: TonB family protein.
  
 
  0.611
SMB84250.1
Peptidase M56 BlaR1; InterPro IPR008756; KEGG: spl:Spea_3209 TonB family protein; SPTR: A4AVP7 Putative uncharacterized protein; PFAM: peptidase M56 BlaR1.
  
 
  0.595
SMB97205.1
KEGG: ade:Adeh_0994 hypothetical protein; SPTR: A1ZY97 Putative uncharacterized protein.
 
     0.588
SMB94262.1
Protein TonB.
  
 
  0.557
SMB88579.1
Beta-lactamase; InterPro IPR001460:IPR002137; COGs: COG2602 Beta-lactamase class D; KEGG: shw:Sputw3181_0786 beta-lactamase; SPTR: A2V4C8 Penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; PRIAM: Beta-lactamase.
 
  
 0.431
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.