STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97338.1COGs: COG2224 Isocitrate lyase; KEGG: cti:RALTA_A1766 isocitrate lyase; SPTR: A2A084 Isocitrate lyase. (105 aa)    
Predicted Functional Partners:
SMB97336.1
Malate synthase; InterPro IPR001465:IPR006252; COGs: COG2225 Malate synthase; KEGG: rce:RC1_2688 malate synthase A; SPTR: A2U9X8 Malate synthase; PFAM: malate synthase; PRIAM: Malate synthase; TIGRFAM: malate synthase A; Belongs to the malate synthase family.
 
 0.996
SMB97339.1
InterPro IPR000918; COGs: COG2224 Isocitrate lyase; KEGG: hypothetical protein; SPTR: A2A084 Isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase.
     0.988
SMB95715.1
InterPro IPR012302:IPR012301:IPR002505:IPR002016; COGs: COG0281 Malic enzyme; KEGG: glo:Glov_1262 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)), phosphate acetyltransferase; SPTR: A3I2U7 NADP-dependent malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+))., Phosphate acetyltransferase.
   
 
 0.856
SMB93851.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
 
 0.827
SMB91774.1
Aconitase; InterPro IPR001030:IPR000573:IPR006248; COGs: COG1048 Aconitase A; KEGG: zmo:ZMO0543 aconitate hydratase; SPTR: A3I0I7 Aconitate hydratase; PFAM: aconitate hydratase domain protein; TIGRFAM: aconitate hydratase.
   
 
 0.683
SMB89366.1
FAD linked oxidase domain protein; InterPro IPR004113:IPR006094:IPR000276; COGs: COG0277 FAD/FMN-containing dehydrogenase; KEGG: gur:Gura_0648 FAD linked oxidase domain-containing protein; SPTR: A3J194 FAD/FMN-containing dehydrogenase; PFAM: FAD linked oxidase domain protein.
     
 0.666
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
   
  
 0.626
SMB80924.1
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; InterPro IPR000887; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; KEGG: scl:sce5154 KDPG and KHG aldolase; SPTR: A1HMS5 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase.
     
 0.521
SMB98645.1
KDPG and KHG aldolase; InterPro IPR000887; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; KEGG: ccs:CCNA_01562 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase; SPTR: A3XJI5 Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; PFAM: KDPG and KHG aldolase.
     
 0.521
SMC00026.1
Citrate synthase; InterPro IPR002020:IPR010953; COGs: COG0372 Citrate synthase; KEGG: scl:sce8281 hypothetical protein; SPTR: A3I1U9 Citrate synthase; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; TIGRFAM: citrate synthase I.
   
 
 0.506
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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