STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB97355.1Hypothetical protein. (119 aa)    
Predicted Functional Partners:
carA
Carbamoyl-phosphate synthase small subunit; InterPro IPR006220:IPR011702:IPR001317:IPR002474:IPR000991:IPR0062 74; COGs: COG0505 Carbamoylphosphate synthase small subunit; KEGG: hypothetical protein; SPTR: A5ZC55 Putative uncharacterized protein; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; Belongs to the CarA family.
       0.586
SMB97356.1
Carbamoyl-phosphate synthase large subunit; InterPro IPR005483:IPR003135:IPR005479:IPR011607:IPR005480:IPR0054 81:IPR011761:IPR006275; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); KEGG: cad; carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase; K11540 carbamoyl-phosphate synthase / aspartate carbamoyltransferase / dihydroorotase; SPTR: A5ZC56 Putative uncharacterized protein; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; MGS domain protein; Carbamoyl-pho [...]
       0.566
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.