STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB95788.1PKD domain containing protein; InterPro IPR000601; KEGG: sus:Acid_3175 hypothetical protein; SPTR: A1ZU28 PKD domain protein; SMART: PKD domain containing protein; PFAM: PKD domain containing protein. (1153 aa)    
Predicted Functional Partners:
SMB98635.1
Hypothetical protein; KEGG: sde:Sde_3094 GntR family transcriptional regulator; SPTR: A5ZFT4 Putative uncharacterized protein.
   
  0.701
SMC00425.1
Hypothetical protein; KEGG: geo:Geob_3131 fibronectin type III domain protein; SPTR: A1ZPH6 Fibronectin type III domain protein.
  
     0.669
SMC00032.1
OmpA/MotB domain protein; InterPro IPR006664:IPR011659:IPR006665:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HZL6 Peptidoglycan associated periplasmic protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
 
  0.649
SMB89590.1
KEGG: prw:PsycPRwf_0236 hypothetical protein; SPTR: A1ZTP8 Membrane protein, putative.
  
     0.632
SMB87844.1
Hypothetical protein; InterPro IPR017871; SPTR: A1ZSS8 Putative outer membrane protein, probably involved in nutrient binding.
  
 
   0.619
SMB95783.1
Endonuclease/exonuclease/phosphatase; InterPro IPR005135; COGs: COG3568 Metal-dependent hydrolase; KEGG: scl:sce4697 endonuclease/exonuclease/phosphatase; SPTR: A3I1W2 Putative uncharacterized protein; PFAM: Endonuclease/exonuclease/phosphatase.
 
     0.610
SMC00268.1
KEGG: abo:ABO_0923 hypothetical protein; SPTR: A1ZQD8 Membrane protein, putative.
  
     0.596
SMB94806.1
Hypothetical protein; SPTR: A1ZYD3 Putative uncharacterized protein.
  
     0.577
SMB82842.1
Hypothetical protein; SPTR: A1ZCR3 Putative uncharacterized protein.
  
     0.572
SMB89308.1
KEGG: bpe:BP2072 putative lipoprotein; SPTR: A3I1M6 Putative uncharacterized protein.
  
     0.546
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.