STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB91435.1Hypothetical protein. (57 aa)    
Predicted Functional Partners:
SMB96846.1
InterPro IPR001424; COGs: COG2032 Cu/Zn superoxide dismutase; KEGG: dia:Dtpsy_1880 superoxide dismutase copper/zinc binding; SPTR: A3UAG3 Superoxide dismutase [Cu-Zn]; PFAM: superoxide dismutase copper/zinc binding.
   
 0.884
SMB83644.1
Copper-translocating P-type ATPase; InterPro IPR001757:IPR001802:IPR001756:IPR006121:IPR008250:IPR0058 34:IPR000150:IPR006416:IPR006403; COGs: COG2217 Cation transport ATPase; KEGG: gbm:Gbem_2170 copper-translocating P-type ATPase; SPTR: Q0W4B5 Cu(2+)-binding/translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
  
   0.616
SMC00308.1
TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; InterPro IPR000695:IPR001757:IPR008250:IPR005834:IPR006416:IPR0064 04; COGs: COG2217 Cation transport ATPase; KEGG: spc:Sputcn32_1966 heavy metal translocating P-type ATPase; SPTR: A2TQ41 Cation-transporting ATPase, P-type, putative zinc-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
  
   0.616
SMC00457.1
KEGG: bha:BH1193 hypothetical protein; SPTR: A3HZE4 Putative uncharacterized protein.
   
   0.614
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.410
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.