STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83449.1Sugar-phosphate isomerase, RpiB/LacA/LacB family; InterPro IPR003500:IPR004785; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; KEGG: nam:NAMH_1207 ribose 5-phosphate isomerase B; SPTR: A3HU34 Ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase. (142 aa)    
Predicted Functional Partners:
SMB99820.1
Ribulose-phosphate 3-epimerase; InterPro IPR000056; COGs: COG0036 Pentose-5-phosphate-3-epimerase; KEGG: glo:Glov_3613 ribulose-phosphate 3-epimerase; SPTR: A3HTG8 Ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase.
 
 0.977
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
 
 
 0.971
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
 
 
  0.965
SMB98496.1
Transketolase central region; InterPro IPR005476:IPR005475; COGs: COG3958 Transketolase C-terminal subunit; KEGG: pca:Pcar_2719 transketolase, C-terminal subunit; SPTR: A1ZKU9 Transketolase; PFAM: Transketolase central region; Transketolase domain protein.
 
  
 0.944
SMB98500.1
Transketolase domain protein; InterPro IPR005474; COGs: COG3959 Transketolase N-terminal subunit; KEGG: gbm:Gbem_0279 transketolase domain protein; SPTR: A1ZD78 Transketolase subunit A; PFAM: Transketolase domain protein.
 
  
 0.942
SMB87964.1
1-phosphofructokinase; InterPro IPR011611:IPR001209:IPR002173:IPR017583; COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); KEGG: gbm:Gbem_3234 1-phosphofructokinase; SPTR: A4LFV9 1-phosphofructokinase; PFAM: PfkB domain protein; TIGRFAM: 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.903
SMB88780.1
Ribose-phosphate pyrophosphokinase; InterPro IPR000836:IPR000842:IPR005946; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; KEGG: cco:CCC13826_1015 ribose-phosphate pyrophosphokinase; SPTR: A3HZE2 Ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase.
    
 0.889
SMB87293.1
COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: hypothetical protein; SPTR: A1ZSW6 Uracil phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase.
 
  
 0.884
SMB98140.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; InterPro IPR005841:IPR005844:IPR005846:IPR005845:IPR016066; COGs: COG1109 Phosphomannomutase; KEGG: baa:BA_0026 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; SPTR: A1ZX67 Phosphomannomutase, putative; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II.
     
 0.859
SMB84593.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.842
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.