STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB83839.1KEGG: ppd:Ppro_2108 hypothetical protein; SPTR: A0ZIT2 Putative uncharacterized protein. (126 aa)    
Predicted Functional Partners:
SMB97807.1
Transport system permease protein; InterPro IPR000522; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; KEGG: saz:Sama_0761 iron-compound ABC transporter, permease protein; SPTR: A3I9B1 Iron(III) dicitrate transport system permease protein fecD; PFAM: transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.961
SMB93753.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; KEGG: cvi:CV_2234 enterobactin-iron transport system ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related; SPTR: A3ICG9 Iron(III) dicitrate transport system (Permease).
  
 0.915
SMB83841.1
Short-chain dehydrogenase/reductase SDR; InterPro IPR002347:IPR002198:IPR013968; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; KEGG: scl:sce8810 short chain dehydrogenase/reductase family oxidoreductase; SPTR: Q6GDV6 Uncharacterized oxidoreductase SAR2567; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
   0.631
SMB83817.1
Alpha amylase catalytic region; InterPro IPR015171:IPR006047:IPR006589; COGs: COG0366 Glycosidase; KEGG: cja:CJA_0735 alpha-amylase, putative, amy13E; SPTR: A1ZWA8 Neopullulanase; SMART: alpha amylase catalytic sub domain; PFAM: alpha amylase catalytic region; Cyclomaltodextrinase; Belongs to the glycosyl hydrolase 13 family.
       0.613
SMB83846.1
Alpha amylase catalytic region; InterPro IPR006047:IPR006589; COGs: COG0366 Glycosidase; KEGG: ppr:PBPRB0415 putative glycosidase; SPTR: A5ZCR8 Putative uncharacterized protein; SMART: alpha amylase catalytic sub domain; PFAM: alpha amylase catalytic region.
       0.552
SMB83847.1
Hypothetical protein.
       0.492
hisI
InterPro IPR002496:IPR008179; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; KEGG: amc:MADE_01111 phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase; SPTR: A3HZJ3 Phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP diphosphatase; In the N-terminal section; belongs to the PRA-CH family.
   
   0.439
SMB83813.1
Conserved hypothetical protein; InterPro IPR011971; KEGG: pfo:Pfl01_4357 hypothetical protein; SPTR: A3U8G4 Putative uncharacterized protein.
       0.433
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.