STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84066.1KEGG: ece:Z1417 chaperone-modulator protein CbpM. (107 aa)    
Predicted Functional Partners:
SMB84074.1
Heat shock protein DnaJ domain protein; InterPro IPR003095:IPR002939:IPR001623; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; KEGG: dde:Dde_1659 heat shock protein DnaJ-like; SPTR: A5ZIH1 Putative uncharacterized protein; SMART: heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein.
       0.631
SMB84075.1
KEGG: rsk:RSKD131_3601 DNA-binding protein; SPTR: A3WEL2 Probable DNA-binding protein.
       0.424
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.