STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB84340.1KEGG: bar:GBAA2670 hypothetical protein; SPTR: Q54L61 Putative uncharacterized protein. (178 aa)    
Predicted Functional Partners:
SMB99750.1
Metal dependent phosphohydrolase; InterPro IPR006674:IPR003607; COGs: COG1418 HD superfamily hydrolase; KEGG: dar:Daro_1102 metal-dependent phosphohydrolase; SPTR: A0BFX1 Chromosome undetermined scaffold_105, whole genome shotgun sequence; SMART: metal-dependent phosphohydrolase HD region; PFAM: metal-dependent phosphohydrolase HD sub domain.
 
     0.708
SMB84322.1
Creatininase; InterPro IPR003785; COGs: COG1402 Uncharacterized protein putative amidase; KEGG: sit:TM1040_3053 creatininase; SPTR: A4CPA6 Putative uncharacterized protein; PFAM: Creatininase.
       0.551
SMB84307.1
Proline-specific peptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
       0.539
SMB84341.1
Aspartate ammonia-lyase; InterPro IPR003031:IPR000362:IPR004708; COGs: COG1027 Aspartate ammonia-lyase; KEGG: ade:Adeh_1757 aspartate ammonia-lyase; SPTR: A3ZKT0 Aspartate ammonia-lyase; PFAM: fumarate lyase; TIGRFAM: aspartate ammonia-lyase.
       0.465
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.