STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98299.1InterPro IPR001707; COGs: COG4845 Chloramphenicol O-acetyltransferase; KEGG: vsa:VSAL_I2074 chloramphenicol acetyltransferase; SPTR: A3J3I1 Chloramphenicol acetyltransferase (CAT-III); PFAM: chloramphenicol acetyltransferase. (211 aa)    
Predicted Functional Partners:
SMB98302.1
Putative transcriptional regulator, Crp/Fnr family; InterPro IPR002373:IPR000595:IPR001865; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; KEGG: scl:sce2073 hypothetical protein; SPTR: A3YVU5 Cyclic nucleotide-binding domain (CNMP-BD) protein; SMART: cyclic nucleotide-binding; PFAM: cyclic nucleotide-binding.
       0.530
SMB99259.1
KEGG: saz:Sama_2469 hypothetical protein; SPTR: A3I136 Putative lipoprotein.
  
     0.469
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.