STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB98375.1Glucose-methanol-choline oxidoreductase; InterPro IPR000172; COGs: COG2303 Choline dehydrogenase and related flavoprotein; KEGG: pat:Patl_2686 glucose-methanol-choline oxidoreductase; SPTR: A3HX20 Oxidoreductase; PFAM: glucose-methanol-choline oxidoreductase. (558 aa)    
Predicted Functional Partners:
SMB98373.1
Hypothetical protein; KEGG: amc:MADE_00435 twin-arginine translocation pathway signal; SPTR: A3HX19 Putative uncharacterized protein.
 
 0.961
SMB98370.1
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; KEGG: sme:SMc03162 hypothetical protein; SPTR: A3HX24 Putative uncharacterized protein; InterPro IPR011418:IPR012307; PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein.
 
     0.876
SMB97168.1
WD-40 repeat protein; InterPro IPR001680; COGs: COG2319 FOG: WD40 repeat; KEGG: scl:sce2686 WD repeat-containing protein; SPTR: A1ZKM8 WD-40 repeat-protein; SMART: WD-40 repeat protein; PFAM: WD-40 repeat protein.
    
  0.866
SMB98371.1
Oxidoreductase domain protein; InterPro IPR000683:IPR004104:IPR016160; COGs: COG0673 dehydrogenase and related protein; KEGG: swd:Swoo_0362 oxidoreductase domain-containing protein; SPTR: A3HX23 Oxidoreductase, Gfo/Idh/MocA family protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain.
 
     0.863
SMB98378.1
Xylose isomerase domain protein TIM barrel; InterPro IPR012307:IPR006311; COGs: COG1082 Sugar phosphate isomerase/epimerase; KEGG: pat:Patl_2692 twin-arginine translocation pathway signal; SPTR: A0YAF3 Sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase domain protein TIM barrel.
 
     0.798
SMB98361.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: ccs:CCNA_01698 cycloisomaltooligosaccharide glucanotransferase precursor; PFAM: protein of unknown function DUF1080; SPTR: A3I2W3 Putative multi-domain protein.
 
     0.787
SMB98363.1
Xylose isomerase domain protein TIM barrel; InterPro IPR012307:IPR006311; COGs: COG3622 Hydroxypyruvate isomerase; KEGG: pat:Patl_2687 twin-arginine translocation pathway signal; SPTR: A4AW44 Putative uncharacterized protein; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the hyi family.
 
     0.751
SMB97221.1
Ankyrin; InterPro IPR002110; COGs: COG0666 FOG: Ankyrin repeat; KEGG: gbe:GbCGDNIH1_1865 ankyrin; SPTR: A2TRI8 Ankyrin.
    
  0.743
SMC00097.1
Hypothetical protein.
    
  0.743
SMC00696.1
Ankyrin; InterPro IPR002110; KEGG: hypothetical protein; SPTR: B9RFZ3 ATP binding protein, putative; PFAM: Ankyrin.
    
  0.743
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.