STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB88002.1Efflux transporter, RND family, MFP subunit; InterPro IPR006143; KEGG: xom:XOO_0677 ABC transporter permease; SPTR: A5ZJ47 Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit. (415 aa)    
Predicted Functional Partners:
SMB88001.1
InterPro IPR003423; COGs: COG1538 Outer membrane protein; KEGG: pca:Pcar_0364 outer membrane channel protein; SPTR: A1ZV52 Outer membrane protein TolC, putative; PFAM: outer membrane efflux protein.
 
   0.939
SMB87988.1
Protein of unknown function DUF214; InterPro IPR003838; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; KEGG: xcv:XCV3758 ABC transporter permease; SPTR: A0Y095 ABC transporter, permease protein; PFAM: protein of unknown function DUF214.
 
   0.864
SMB87995.1
Protein of unknown function DUF214; InterPro IPR003838; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; KEGG: mxa:MXAN_3650 putative permease; SPTR: A5ZJ48 Putative uncharacterized protein; PFAM: protein of unknown function DUF214.
 
   0.857
SMB91907.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; KEGG: mpo:Mpop_4083 heavy metal efflux pump, CzcA family; SPTR: A4CH05 Putative transport-related, membrane protein.
  
 0.807
SMB80435.1
Heavy metal efflux pump, CzcA family; InterPro IPR001036:IPR003423:IPR004763; COGs: COG3696 Putative silver efflux pump; KEGG: ajs:Ajs_1849 CzcA family heavy metal efflux protein; SPTR: A1ZCV7 Cation efflux system protein, AcrB/AcrD/AcrF family protein; PFAM: acriflavin resistance protein; outer membrane efflux protein; TIGRFAM: heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.807
SMB87984.1
PAS/PAC sensor signal transduction histidine kinase; InterPro IPR004358:IPR003594:IPR003660:IPR000014:IPR005467; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; KEGG: saz:Sama_2860 ATP-binding region, ATPase-like protein; SPTR: A5ZJ54 Putative uncharacterized protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein.
 
     0.791
SMB87997.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; KEGG: aba:Acid345_0367 ABC transporter, ATPase subunit; SPTR: A4CDQ7 Putative ABC transporter ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related.
 
   0.724
SMB79286.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: cps:CPS_3505 ABC transporter, permease protein; SPTR: A3I1I0 Putative transporter permease protein; PFAM: protein of unknown function DUF214.
 
   0.621
SMB79299.1
ABC transporter related; InterPro IPR003439:IPR003593:IPR017871; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; KEGG: cps:CPS_4701 ABC transporter, ATP-binding protein; SPTR: A4CNP7 Putative ABC transport system, ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related.
 
   0.570
SMB98987.1
Protein of unknown function DUF214; InterPro IPR003838; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; KEGG: mxa:MXAN_4173 putative ABC transporter, permease protein; SPTR: A1ZZC4 ABC transporter efflux protein; PFAM: protein of unknown function DUF214.
  
   0.568
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.