STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00560.1SSS sodium solute transporter superfamily; InterPro IPR001734; COGs: COG4146 symporter; KEGG: amc:MADE_00234 putative sodium/hexose cotransport protein; SPTR: A3J5X8 Putative sodium/hexose cotransport protein; PFAM: Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (560 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
  
    0.668
SMB90882.1
Na+/solute symporter; InterPro IPR001734; COGs: COG0591 Na+/proline symporter; KEGG: aba:Acid345_3352 SSS sodium solute transporter superfamily; SPTR: A1ZHK2 Sodium/iodide co-transporter; PFAM: Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.568
SMC00558.1
InterPro IPR001303; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; KEGG: shn:Shewana3_2065 L-ribulose-5-phosphate 4-epimerase; SPTR: A3XLT2 L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein.
  
    0.495
SMC00561.1
KEGG: sus:Acid_2992 alpha-N-arabinofuranosidase; SPTR: A3XLT4 Alpha-L-arabinofuranosidase A.
  
    0.461
SMB97203.1
Peptidase M56 BlaR1; InterPro IPR008756; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; KEGG: sus:Acid_5553 peptidase M56, BlaR1; SPTR: A1ZPU6 TonB domain/peptidase M56 domain protein, putative; PFAM: peptidase M56 BlaR1.
  
     0.454
SMC00556.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 
    0.439
araB
L-ribulokinase; InterPro IPR000577:IPR005929; COGs: COG1069 Ribulose kinase; KEGG: she:Shewmr4_1977 ribulokinase; SPTR: A3XLT3 Ribulokinase; PFAM: carbohydrate kinase FGGY; TIGRFAM: L-ribulokinase.
       0.438
SMC00562.1
PFAM: alpha-L-arabinofuranosidase domain protein; InterPro IPR010720; COGs: COG3534 Alpha-L-arabinofuranosidase; KEGG: Os11g0131900; hypothetical protein; SPTR: A3XLT4 Alpha-L-arabinofuranosidase A.
  
    0.405
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.