STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00564.1Glycosyl hydrolase family 98 putative carbohydrate binding module; InterPro IPR013222; KEGG: slo:Shew_2289 glycosy hydrolase family protein; SPTR: A3ZT25 Putative uncharacterized protein; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module. (233 aa)    
Predicted Functional Partners:
SMB98699.1
Putative xylan esterase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: sus:Acid_7102 putative xylan esterase; SPTR: A3ZY79 Putative uncharacterized protein.
  
     0.619
SMC00563.1
Conserved hypothetical protein; InterPro IPR005240; COGs: COG1808 membrane protein; KEGG: bcj:BCAS0106 hypothetical protein; SPTR: A5ZF20 Putative uncharacterized protein; PFAM: conserved hypothetical protein.
       0.441
SMC00561.1
KEGG: sus:Acid_2992 alpha-N-arabinofuranosidase; SPTR: A3XLT4 Alpha-L-arabinofuranosidase A.
 
     0.411
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.