STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87525.1Hypothetical protein. (276 aa)    
Predicted Functional Partners:
SMB87518.1
Acyl-CoA dehydrogenase type 2 domain; InterPro IPR013107; COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: mpo:Mpop_0138 cyclic nucleotide-binding protein; SPTR: A5PDQ7 Acyl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase type 2 domain.
       0.508
SMB87502.1
Methyltransferase type 12; InterPro IPR013216:IPR008715:IPR013217; KEGG: msl:Msil_3595 methyltransferase type 12; SPTR: A5PDQ6 Methyltransferase type 12; PFAM: Methyltransferase type 12; NodS family protein; Methyltransferase type 11.
       0.484
SMB87509.1
LmbE family protein; InterPro IPR003737; COGs: COG2120 conserved hypothetical protein LmbE homologs; KEGG: msl:Msil_3594 LmbE family protein; SPTR: A3TNM7 Putative uncharacterized protein; PFAM: LmbE family protein.
       0.484
SMB87528.1
Hypothetical protein.
       0.468
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.