STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87537.1Cell shape determining protein, MreB/Mrl family; InterPro IPR004753; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; KEGG: gme:Gmet_0918 rod shape-determining protein MreB; SPTR: A3HY56 Rod shape-determining protein MreB; PFAM: cell shape determining protein MreB/Mrl; TIGRFAM: cell shape determining protein, MreB/Mrl family. (341 aa)    
Predicted Functional Partners:
SMB87546.1
PFAM: Rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; InterPro IPR007221:IPR005223; COGs: COG1792 Cell shape-determining protein; KEGG: sat:SYN_00553 rod shape-determining protein; SPTR: A3HY57 Putative rod shape-determining protein MreC.
 
 
 0.988
SMB87555.1
Penicillin-binding protein 2; InterPro IPR001460:IPR005311:IPR017790; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: gme:Gmet_0928 peptidoglycan glycosyltransferase; SPTR: A3HY59 Penicillin-binding protein 2 (PBP-2); PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2.
 
 
 0.921
SMB87564.1
Cell cycle protein; InterPro IPR001182; COGs: COG0772 Bacterial cell division membrane protein; KEGG: acp:A2cp1_1455 rod shape-determining protein RodA; SPTR: A3HY60 Putative transmembrane rod shape-determining protein; PFAM: cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.874
SMC00109.1
KEGG: mca:MCA0103 penicillin-binding protein 2; SPTR: A3HY59 Penicillin-binding protein 2 (PBP-2); PFAM: penicillin-binding protein transpeptidase; InterPro IPR001460; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
 
 
 0.830
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.727
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
 
 
0.664
SMB85365.1
Hypothetical protein.
  
 
 0.638
secF
Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
  
  
 0.618
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
  
 0.616
SMB91452.1
Peptidoglycan glycosyltransferase; SMART: PASTA domain containing protein; PFAM: penicillin-binding protein transpeptidase; PASTA domain containing protein; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; KEGG: gsu:GSU3075 penicillin-binding protein; SPTR: A3HXP3 Penicillin-binding protein; InterPro IPR001460:IPR005543:IPR005311.
 
 
 
 0.571
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.