STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87119.1TonB-dependent receptor plug; InterPro IPR012910; KEGG: mxa:MXAN_4746 TonB-dependent receptor; SPTR: A3HS05 Putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor plug. (1027 aa)    
Predicted Functional Partners:
SMB87116.1
RagB/SusD domain-containing protein; InterPro IPR012944; SPTR: A3HS04 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
 
 
   0.950
SMB97296.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: mxa:MXAN_4747 putative lipoprotein; SPTR: A4CMH2 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
 
 
   0.849
SMB80706.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A3XPW4 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.847
SMB88974.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A4BX47 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.843
SMB87232.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A3XIS5 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
 
 
   0.832
SMB97898.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: mxa:MXAN_4747 putative lipoprotein; SPTR: A4BX47 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
 
 
   0.832
SMB92333.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: similar to LOC100125064 protein; SPTR: A3XL35 Putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
 
 
   0.828
SMB93352.1
SPTR: A3U7K7 Putative membrane protein.
  
 
   0.822
SMB93351.1
RagB/SusD domain protein; InterPro IPR012944; SPTR: A3XL35 Putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.819
SMB97363.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: mxa:MXAN_4747 putative lipoprotein; SPTR: A4CMH2 Putative outer membrane protein, probably involved in nutrient binding; PFAM: RagB/SusD domain protein.
  
 
   0.806
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.