STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMB87137.1KEGG: hypothetical protein; SPTR: A2TR89 Putative uncharacterized protein. (260 aa)    
Predicted Functional Partners:
SMB82128.1
OmpA/MotB domain protein; InterPro IPR001035:IPR006664:IPR006665:IPR011659:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HXW3 OmpA family protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
  
 
 0.672
SMB98615.1
KEGG: geo:Geob_3789 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SPTR: A7I538 Putative PAS/PAC sensor protein.
    
 0.644
SMC00669.1
Putative sensor with HAMP domain; InterPro IPR003660; KEGG: bja:bll2599 two-component hybrid sensor and regulator; SPTR: A1YBU7 Sensor protein (Fragment); SMART: histidine kinase HAMP region domain protein; PFAM: histidine kinase HAMP region domain protein.
    
 0.619
SMC00032.1
OmpA/MotB domain protein; InterPro IPR006664:IPR011659:IPR006665:IPR013026; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; KEGG: hypothetical protein; K03640 peptidoglycan-associated lipoprotein; SPTR: A3HZL6 Peptidoglycan associated periplasmic protein; PFAM: OmpA/MotB domain protein; WD40 domain protein beta Propeller.
  
 
 0.613
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
 
  0.604
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
     
 0.601
SMB97203.1
Peptidase M56 BlaR1; InterPro IPR008756; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; KEGG: sus:Acid_5553 peptidase M56, BlaR1; SPTR: A1ZPU6 TonB domain/peptidase M56 domain protein, putative; PFAM: peptidase M56 BlaR1.
    
 0.561
SMB95465.1
COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; KEGG: bba:Bd1448 hypothetical protein; SPTR: A1ZWG4 Putative uncharacterized protein.
 
   0.561
SMB99323.1
Two component transcriptional regulator, AraC family; InterProIPR000005:IPR004358:IPR001761:IPR001789:IPR 003594:IPR003661:IPR005467; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: pat:Patl_1836 two component AraC family transcriptional regulator; SPTR: A5ZIK5 Sensor protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; histidine kinase A domain protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; periplasmic binding protein/LacI transcrip [...]
    
 0.554
SMB95953.1
Peptidase S9 prolyl oligopeptidase active site domain protein; InterPro IPR002469:IPR001375; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: sus:Acid_5975 peptidase S9 prolyl oligopeptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: A1ZL59 Dipeptidyl-peptidase.
  
   0.523
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.