STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00239.1InterPro IPR005599; KEGG: sus:Acid_4353 Alg9 family protein mannosyltransferase; SPTR: A3U4X4 Putative uncharacterized protein; PFAM: Alg9 family protein mannosyltransferase. (535 aa)    
Predicted Functional Partners:
SMC00238.1
Protein of unknown function UPF0079; InterPro IPR003442; COGs: COG0802 ATPase or kinase; KEGG: geo:Geob_2940 protein of unknown function UPF0079; SPTR: A5ZJB6 Putative uncharacterized protein; PFAM: protein of unknown function UPF0079.
       0.723
SMC00240.1
Aminotransferase class I and II; InterPro IPR004839; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; KEGG: mxa:MXAN_0531 aminotransferase, class I; SPTR: A4F097 Aspartate aminotransferase b protein; PFAM: aminotransferase class I and II.
       0.522
SMC00237.1
Alanine dehydrogenase/PNT domain protein; InterPro IPR007886:IPR007698:IPR008143; COGs: COG0686 Alanine dehydrogenase; KEGG: neu:NE0022 alanine dehydrogenase; SPTR: A1ZZD6 Alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein.
       0.494
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.