STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00280.1InterPro IPR005097; COGs: COG1748 Saccharopine dehydrogenase and related protein; KEGG: hypothetical protein; SPTR: A1ZMX5 Saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase; PRIAM: Saccharopine dehydrogenase (NADP(+), L-glutamate-forming). (451 aa)    
Predicted Functional Partners:
SMB94989.1
InterPro IPR007886:IPR007698; KEGG: Alanine dehydrogenase/PNT, N-terminal domain containing protein; K00291 saccharopine dehydrogenase (NADP+, L-lysine forming); SPTR: A1ZCQ3 Putative uncharacterized protein; PFAM: alanine dehydrogenase/PNT domain protein.
  
  0.983
SMB86793.1
Arginase/agmatinase/formiminoglutamase; InterPro IPR006035; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; KEGG: hypothetical protein; SPTR: A3HY44 Formiminoglutamase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
 
  
  0.586
SMC00281.1
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
     0.585
SMB97343.1
Argininosuccinate lyase; InterPro IPR003031:IPR000362:IPR009049; COGs: COG0165 Argininosuccinate lyase; KEGG: mxa:MXAN_5107 argininosuccinate lyase; SPTR: A4AU29 Argininosuccinate lyase; PFAM: fumarate lyase; TIGRFAM: argininosuccinate lyase.
 
 
  
 0.572
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
  
 
 0.557
SMC00282.1
phospholipase/Carboxylesterase; InterPro IPR003140; KEGG: xau:Xaut_1494 phospholipase/carboxylesterase; SPTR: A1ZJ51 Putative uncharacterized protein; PFAM: phospholipase/Carboxylesterase.
 
     0.552
SMB97874.1
Arginase; InterPro IPR005924:IPR006035; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; KEGG: hypothetical protein; K01476 arginase; SPTR: A3HTQ0 Arginase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.
 
  
  0.473
SMB96520.1
Aldehyde Dehydrogenase; InterPro IPR015590:IPR016160; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; KEGG: dat:HRM2_38600 NAD-dependent aldehyde dehydrogenase family protein; SPTR: A1ZGC0 Piperideine-6-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.453
SMB91292.1
Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: sme:SM_b21023 hypothetical protein; SPTR: A3HYH0 Antibiotic biosynthesis monooxygenase domain protein; PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.450
SMC00430.1
Phage shock protein C (PspC) family protein; SPTR: A3HZC8 Putative uncharacterized protein.
  
     0.446
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.