STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00337.1Signal transduction histidine kinase, LytS; InterPro IPR010559; COGs: COG3275 Putative regulator of cell autolysis; KEGG: aba:Acid345_0419 periplasmic sensor signal transduction histidine kinase; SPTR: A1ZNY7 Putative two component system, sensor protein; PFAM: histidine kinase internal region. (362 aa)    
Predicted Functional Partners:
SMC00336.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: hypothetical protein; SPTR: A1ZNY6 Two-component system response regulator protein; SMART: response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region.
 
  0.953
SMB97960.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: sus:Acid_2309 response regulator receiver protein; SPTR: A3HUX3 Putative two-component response regulator autolysis regulator LytR; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver.
  
  0.836
SMB97961.1
Two component transcriptional regulator, LytTR family; KEGG: sus:Acid_2309 response regulator receiver protein; SPTR: A1ZCY6 Two-component system response regulator; SMART: response regulator receiver; PFAM: LytTr DNA-binding region; response regulator receiver; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family.
  
  0.836
SMB99672.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: sdn:Sden_1209 LytTr DNA-binding region; SPTR: A1ZCY6 Two-component system response regulator; SMART: response regulator receiver; PFAM: LytTr DNA-binding region; response regulator receiver.
  
  0.835
SMB91430.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: hypothetical protein; SPTR: A1ZDS6 Two-component system response regulator; SMART: response regulator receiver; PFAM: LytTr DNA-binding region; response regulator receiver.
  
  0.832
SMB93593.1
InterPro IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: aba:Acid345_3487 transcriptional regulator, LytR/AlgR family; SPTR: A1ZFR4 Two-component system response regulator protein; SMART: response regulator receiver; PFAM: response regulator receiver.
  
  0.832
SMC00700.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: hypothetical protein; SPTR: A1ZDS6 Two-component system response regulator; SMART: response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region.
  
  0.832
SMB93089.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: pha:PSHAa1405 response regulator in two-component regulatory system; SPTR: A3HWW6 Response regulator receiver domain protein (CheY-like); SMART: response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region.
  
  0.831
SMB91809.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: sml:Smlt0770 putative two-component system, response regulator transcriptional regulatory protein; SPTR: A1ZDF9 Two-component system regulatory protein; SMART: response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region.
  
  0.830
SMB99704.1
Two component transcriptional regulator, LytTR family; InterPro IPR007492:IPR001789; COGs: COG3279 Response regulator of the LytR/AlgR family; KEGG: eli:ELI_12660 two-component response regulator; SPTR: A1ZD68 LytTr DNA-binding response regulator; SMART: response regulator receiver; PFAM: response regulator receiver; LytTr DNA-binding region.
  
  0.830
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.