STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00346.1Hypothetical protein; SPTR: A2TPU5 Putative uncharacterized protein. (302 aa)    
Predicted Functional Partners:
SMC00343.1
KEGG: dat:HRM2_13880 hypothetical protein; SPTR: A1ZJE6 Membrane protein, putative.
 
     0.760
SMB87227.1
Galactokinase; InterPro IPR006206:IPR000705:IPR001174:IPR013750:IPR006204:IPR0062 03; COGs: COG0153 Galactokinase; KEGG: aba:Acid345_1701 galactokinase; SPTR: A3XI28 Galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; TIGRFAM: galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
 0.749
SMC00334.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; InterPro IPR001450:IPR017900; COGs: COG0348 Polyferredoxin; KEGG: gur:Gura_1379 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A3I0Z2 Pyridine nucleotide-disulphide oxidoreductase domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
     0.742
SMB81204.1
4Fe-4S ferredoxin iron-sulfur binding domain protein; InterPro IPR001450:IPR017900; COGs: COG0348 Polyferredoxin; KEGG: mca:MCA0430 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: A3I0Z2 Pyridine nucleotide-disulphide oxidoreductase domain protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
     0.742
SMB91841.1
SPTR: A1ZUQ8 Lipoprotein, putative.
  
     0.740
SMB91943.1
KEGG: scl:sce1276 hypothetical protein; SPTR: A3I0Y4 Putative uncharacterized protein.
  
     0.740
SMB94561.1
SPTR: A1ZUQ8 Lipoprotein, putative.
  
     0.734
SMB99542.1
Hypothetical protein; SPTR: A4ANM8 Putative uncharacterized protein.
  
     0.721
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 0.712
SMC00348.1
Rhodanese domain protein; InterPro IPR001763; COGs: COG0607 Rhodanese-related sulfurtransferase; KEGG: hypothetical protein; SPTR: A4CIC0 Rhodanese-like domain protein; SMART: Rhodanese domain protein; PFAM: Rhodanese domain protein.
 
     0.645
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.