STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC00355.1Protein of unknown function DUF885; InterPro IPR010281:IPR010916; COGs: COG4805 conserved hypothetical protein; KEGG: slo:Shew_1935 hypothetical protein; SPTR: A2V5T2 Putative uncharacterized protein; PFAM: protein of unknown function DUF885. (596 aa)    
Predicted Functional Partners:
SMC00363.1
Peptidase M28; InterPro IPR003137:IPR007484; COGs: COG2234 aminopeptidase; KEGG: pat:Patl_0042 peptidase M28; SPTR: A3VRU8 Putative uncharacterized protein; PFAM: peptidase M28; protease-associated PA domain protein.
  
     0.517
SMC00354.1
Hypothetical protein; KEGG: yps:YPTB0853 thioredoxin 2.
       0.504
SMB82395.1
KEGG: mlo:mll3090 hypothetical protein.
  
     0.503
SMB98828.1
Peptidase M28; InterPro IPR007484; COGs: COG2234 aminopeptidase; KEGG: mmr:Mmar10_0359 peptidase M28; SPTR: A4AUT4 Putative Glutamate carboxypeptidase II; PFAM: peptidase M28.
  
     0.463
SMC00356.1
KEGG: gur:Gura_1723 hypothetical protein; SPTR: A0ZJX3 Putative type IIS restriction/modification enzyme.
       0.436
SMB99846.1
KEGG: sus:Acid_5262 hypothetical protein.
  
     0.429
SMB98750.1
Protein of unknown function DUF1622; InterPro IPR012427; COGs: COG4828 membrane protein; KEGG: azo:azo0128 hypothetical protein; SPTR: A0YJ68 Putative uncharacterized protein; PFAM: protein of unknown function DUF1622.
  
     0.422
SMB84748.1
KEGG: sus:Acid_2933 hypothetical protein; SPTR: A4AN50 Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Hymenobacter roseosalivarius
NCBI taxonomy Id: 645990
Other names: H. roseosalivarius DSM 11622, Hymenobacter roseosalivarius AA-718, Hymenobacter roseosalivarius DSM 11622, Hymenobacter roseosalivarius str. DSM 11622, Hymenobacter roseosalivarius strain DSM 11622
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.